PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G030200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 403aa    MW: 44076.1 Da    PI: 7.8968
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G030200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.3e-13335380655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  Aqcoe1G030200.1.p 335 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKELQ 380
                        689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.193329379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-16332390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.82E-12333384No hitNo description
Gene3DG3DSA:4.10.280.109.5E-16334390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-13335385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-9335380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048573Biological Processphotoperiodism, flowering
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MDANLLRQQQ MNSGLLRYRS APSSLFANFM DGEDDFIASH HRSSSPEAES MFARFMNCGD  60
STSPSLHEIG EKSAIKAEVS VGNNRSSSQF LGVIDEHESE QILFNTPPPL PQPPKQQAPM  120
SNHASNVAEN VYRVASSMGL DHQSSQMKMG NSNLIRHSSS PAGLFANLNV ENGYAVMRGI  180
GNFGAGNSTN EAASTRRLKN QMNYPSGPPS SSGLMSPISE VGSESIGTCA GDGGSVGNSN  240
VSNQYPPNFP LNSWEDSALE NFTSLKRFRD ADTKMHSGLN SSEPENPEAG NQTRNLTHHF  300
SLPKTSVEMA AILQFQDSVP CKIRAKRGCA THPRSIAERV RRTRISERMR KLQELVPNMD  360
KQTNTADMLD LAVEYIKELQ KQVKKLNDNR ATCTCSSKQK PY*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010651262.11e-137PREDICTED: transcription factor bHLH130-like isoform X2
TrEMBLA5B8901e-122A5B890_VITVI; Putative uncharacterized protein
STRINGVIT_06s0004g01740.t011e-116(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-77bHLH family protein